Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm15547-201ENSMUST00000122152 333 ntBASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm28882-201ENSMUST00000185504 314 ntBASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm8712-201ENSMUST00000221090 701 ntBASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Srrm4Q8BKA3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm24845-201ENSMUST00000158034 109 ntBASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm3096-201ENSMUST00000185770 364 ntBASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm42937-201ENSMUST00000197360 752 ntBASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Srrm4Q8BKA3 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Gm14832-201ENSMUST00000121289 322 ntBASIC10.59□□□□□ -0.71
Srrm4Q8BKA3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms