Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Depdc1bQ8BH88 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Depdc1bQ8BH88 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Depdc1bQ8BH88 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm18304-201ENSMUST00000189162 546 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm31256-201ENSMUST00000194705 506 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm37466-201ENSMUST00000195692 652 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.27□□□□□ -0.29
Depdc1bQ8BH88 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms