Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpp38Q80UU2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gm15610-201ENSMUST00000120584 195 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gm20482-202ENSMUST00000174729 825 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gm38241-201ENSMUST00000192641 898 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gm13097-201ENSMUST00000210722 397 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpp38Q80UU2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm5419-201ENSMUST00000119301 527 ntBASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm18893-201ENSMUST00000198416 943 ntBASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms