Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh19Q80TF3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Gm28071-201ENSMUST00000190355 478 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh19Q80TF3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Nsd1-205ENSMUST00000224693 852 ntBASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms