Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Gm11978-201ENSMUST00000122315 466 ntBASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Gm8712-201ENSMUST00000221090 701 ntBASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf38bQ80SY5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm17391-201ENSMUST00000171036 126 ntBASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm9555-201ENSMUST00000200908 583 ntBASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms