Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm28302-201ENSMUST00000187931 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm28646-201ENSMUST00000188220 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm28205-201ENSMUST00000189177 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm29032-201ENSMUST00000189797 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm28695-201ENSMUST00000190300 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm37448-201ENSMUST00000192795 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh8Q7TSK3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh8Q7TSK3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh8Q7TSK3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh8Q7TSK3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdh8Q7TSK3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms