Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Gm7722-201ENSMUST00000120646 741 ntBASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nphp3Q7TNH6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.81□□□□□ -0.04
Nphp3Q7TNH6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm23949-201ENSMUST00000104027 127 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm27552-201ENSMUST00000183351 62 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm27844-201ENSMUST00000183613 62 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm28450-201ENSMUST00000187349 638 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm4034-201ENSMUST00000187674 480 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nphp3Q7TNH6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms