Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gm9550-201ENSMUST00000161130 862 ntBASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cspg5Q71M36 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.71□□□□□ -0.37
Cspg5Q71M36 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Gm9211-201ENSMUST00000182882 975 ntBASIC12.71□□□□□ -0.37
Cspg5Q71M36 Gm7467-201ENSMUST00000185173 652 ntBASIC12.71□□□□□ -0.37
Cspg5Q71M36 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.71□□□□□ -0.37
Cspg5Q71M36 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.71□□□□□ -0.37
Cspg5Q71M36 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.71□□□□□ -0.37
Cspg5Q71M36 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cspg5Q71M36 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.71□□□□□ -0.38
Cspg5Q71M36 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.71□□□□□ -0.38
Cspg5Q71M36 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cspg5Q71M36 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.7□□□□□ -0.38
Cspg5Q71M36 Gm14665-201ENSMUST00000122294 557 ntBASIC12.7□□□□□ -0.38
Cspg5Q71M36 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cspg5Q71M36 Gm10051-201ENSMUST00000145209 414 ntBASIC12.7□□□□□ -0.38
Cspg5Q71M36 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms