Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.35□□□□□ -0.75
Rif1Q6PR54 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Mir1190-201ENSMUST00000116925 96 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm13281-201ENSMUST00000120871 567 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm13445-201ENSMUST00000121664 307 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm29499-201ENSMUST00000189151 486 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm28329-201ENSMUST00000191208 689 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm29171-201ENSMUST00000191397 486 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Ighv5-1-201ENSMUST00000193324 353 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm8342-201ENSMUST00000209839 757 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Mir705-201ENSMUST00000102058 82 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm13827-201ENSMUST00000148801 372 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm22379-201ENSMUST00000157480 131 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.34□□□□□ -0.75
Rif1Q6PR54 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rif1Q6PR54 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm10169-201ENSMUST00000121822 348 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 AC165260.3-201ENSMUST00000225101 665 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms