Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf220Q6PDX6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf220Q6PDX6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm42612-201ENSMUST00000197986 623 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm43170-201ENSMUST00000199827 612 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm20949-201ENSMUST00000206478 952 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm7730-201ENSMUST00000212486 454 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms