Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 AC154257.1-202ENSMUST00000224729 843 ntBASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Gm23105-201ENSMUST00000083719 134 ntBASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd4Q6PDQ2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Olfr584-201ENSMUST00000098210 964 ntBASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd4Q6PDQ2 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm25072-201ENSMUST00000175233 235 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm42657-201ENSMUST00000201746 211 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm45594-201ENSMUST00000211717 241 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 AC164437.3-201ENSMUST00000228323 347 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Gm42816-201ENSMUST00000198433 325 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd4Q6PDQ2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Gm8899-201ENSMUST00000214635 1332 ntBASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Gm14892-201ENSMUST00000117636 267 ntBASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Mir6998-201ENSMUST00000183343 64 ntBASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Gm30671-201ENSMUST00000214898 318 ntBASIC15.63■□□□□ 0.09
Chd4Q6PDQ2 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms