Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Map1b-203ENSMUST00000223725 2669 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm14109-201ENSMUST00000118814 309 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm14832-201ENSMUST00000121289 322 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sdc3Q64519 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm9022-201ENSMUST00000182482 992 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm28882-201ENSMUST00000185504 314 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm38317-201ENSMUST00000195564 343 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm44262-201ENSMUST00000204969 372 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Gzmn-202ENSMUST00000225535 989 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.79□□□□□ -0.52
Sdc3Q64519 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Sdc3Q64519 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sdc3Q64519 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm15703-201ENSMUST00000120250 880 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm42937-201ENSMUST00000197360 752 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gm10312-201ENSMUST00000078515 489 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.78□□□□□ -0.52
Sdc3Q64519 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sdc3Q64519 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms