Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm7857-201ENSMUST00000117957 358 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm12380-201ENSMUST00000119012 544 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm12164-201ENSMUST00000121695 551 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm16570-201ENSMUST00000161951 436 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm28450-201ENSMUST00000187349 638 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Gm28071-201ENSMUST00000190355 478 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Rps4l-202ENSMUST00000204242 789 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.71□□□□□ -0.37
Smarcd1Q61466 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd1Q61466 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd1Q61466 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Cog3-203ENSMUST00000227473 4197 ntBASIC12.7□□□□□ -0.38
Smarcd1Q61466 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.7□□□□□ -0.38
Smarcd1Q61466 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.7□□□□□ -0.38
Smarcd1Q61466 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.7□□□□□ -0.38
Smarcd1Q61466 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd1Q61466 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm23949-201ENSMUST00000104027 127 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm11511-201ENSMUST00000118146 540 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm15711-201ENSMUST00000118889 535 ntBASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.69□□□□□ -0.38
Smarcd1Q61466 Gm4607-201ENSMUST00000206649 577 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms