Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.93□□□□□ -0.5
Vsx2Q61412 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.93□□□□□ -0.5
Vsx2Q61412 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.93□□□□□ -0.5
Vsx2Q61412 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.93□□□□□ -0.5
Vsx2Q61412 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.93□□□□□ -0.5
Vsx2Q61412 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.93□□□□□ -0.5
Vsx2Q61412 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm13315-201ENSMUST00000120376 991 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Rmrp-201ENSMUST00000157463 271 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm27023-201ENSMUST00000182372 285 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm21769-201ENSMUST00000211922 111 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm5950-201ENSMUST00000213337 772 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.92□□□□□ -0.5
Vsx2Q61412 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.92□□□□□ -0.5
Vsx2Q61412 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.92□□□□□ -0.5
Vsx2Q61412 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx2Q61412 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vsx2Q61412 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm15703-201ENSMUST00000120250 880 ntBASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm11597-201ENSMUST00000121423 964 ntBASIC11.91□□□□□ -0.5
Vsx2Q61412 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm44124-201ENSMUST00000204159 472 ntBASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.91□□□□□ -0.5
Vsx2Q61412 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms