Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.14□□□□□ -0.47
Sim1Q61045 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sim1Q61045 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sim1Q61045 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.13□□□□□ -0.47
Sim1Q61045 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sim1Q61045 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.13□□□□□ -0.47
Sim1Q61045 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm6963-201ENSMUST00000147879 379 ntBASIC12.13□□□□□ -0.47
Sim1Q61045 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm9022-201ENSMUST00000182482 992 ntBASIC12.13□□□□□ -0.47
Sim1Q61045 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.13□□□□□ -0.47
Sim1Q61045 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.13□□□□□ -0.47
Sim1Q61045 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sim1Q61045 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.13□□□□□ -0.47
Sim1Q61045 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sim1Q61045 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sim1Q61045 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.13□□□□□ -0.47
Sim1Q61045 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.12□□□□□ -0.47
Sim1Q61045 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.12□□□□□ -0.47
Sim1Q61045 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sim1Q61045 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Sim1Q61045 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sim1Q61045 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.12□□□□□ -0.47
Sim1Q61045 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.12□□□□□ -0.47
Sim1Q61045 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Sim1Q61045 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.12□□□□□ -0.47
Sim1Q61045 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.12□□□□□ -0.47
Sim1Q61045 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sim1Q61045 Mir6958-201ENSMUST00000184207 73 ntBASIC12.12□□□□□ -0.47
Sim1Q61045 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.12□□□□□ -0.47
Sim1Q61045 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.12□□□□□ -0.47
Sim1Q61045 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.12□□□□□ -0.47
Sim1Q61045 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.12□□□□□ -0.47
Sim1Q61045 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.12□□□□□ -0.47
Sim1Q61045 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sim1Q61045 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms