Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.08□□□□□ -0.48
Scn2bQ56A07 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm13492-201ENSMUST00000119772 665 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm12502-201ENSMUST00000120197 444 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm42693-201ENSMUST00000196779 631 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm42627-201ENSMUST00000197347 224 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm5904-201ENSMUST00000210286 865 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm6013-201ENSMUST00000212264 699 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn2bQ56A07 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.07□□□□□ -0.48
Scn2bQ56A07 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gm23931-201ENSMUST00000103842 109 ntBASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gm9083-201ENSMUST00000120423 819 ntBASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gm7809-201ENSMUST00000153199 742 ntBASIC12.06□□□□□ -0.48
Scn2bQ56A07 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gm38002-201ENSMUST00000193255 180 ntBASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.06□□□□□ -0.48
Scn2bQ56A07 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.06□□□□□ -0.48
Scn2bQ56A07 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Scn2bQ56A07 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn2bQ56A07 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.05□□□□□ -0.48
Scn2bQ56A07 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms