Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Syne3Q4FZC9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syne3Q4FZC9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Syne3Q4FZC9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syne3Q4FZC9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syne3Q4FZC9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syne3Q4FZC9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syne3Q4FZC9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Gm42599-201ENSMUST00000201308 469 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Gm3961-201ENSMUST00000204425 994 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Olfr582-201ENSMUST00000098212 960 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syne3Q4FZC9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm15198-201ENSMUST00000117283 177 ntBASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm11222-201ENSMUST00000119005 738 ntBASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm2991-201ENSMUST00000173338 480 ntBASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm43179-201ENSMUST00000198797 275 ntBASIC12.97□□□□□ -0.33
Syne3Q4FZC9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Map1b-203ENSMUST00000223725 2669 ntBASIC12.97□□□□□ -0.33
Syne3Q4FZC9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syne3Q4FZC9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms