Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm25881-201ENSMUST00000157783 103 ntBASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm20426-201ENSMUST00000173657 440 ntBASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm4034-201ENSMUST00000187674 480 ntBASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm4157-201ENSMUST00000211647 679 ntBASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm21811-201ENSMUST00000096485 930 ntBASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf38aQ4FK66 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm23699-201ENSMUST00000158835 135 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm3332-201ENSMUST00000189337 928 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Spcs1-203ENSMUST00000226374 592 ntBASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf38aQ4FK66 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms