Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snx27Q3UHD6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gm22902-201ENSMUST00000158488 302 ntBASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gm42997-202ENSMUST00000200321 985 ntBASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gm43947-201ENSMUST00000203019 959 ntBASIC13.19□□□□□ -0.3
Snx27Q3UHD6 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.19□□□□□ -0.3
Snx27Q3UHD6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm9062-201ENSMUST00000117712 727 ntBASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm11941-201ENSMUST00000119904 610 ntBASIC13.18□□□□□ -0.3
Snx27Q3UHD6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm18893-201ENSMUST00000198416 943 ntBASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm4482-201ENSMUST00000200876 742 ntBASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.18□□□□□ -0.3
Snx27Q3UHD6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms