Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Q3KNL4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12□□□□□ -0.49
Q3KNL4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12□□□□□ -0.49
Q3KNL4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Q3KNL4 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Q3KNL4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Q3KNL4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.99□□□□□ -0.49
Q3KNL4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Q3KNL4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Q3KNL4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.99□□□□□ -0.49
Q3KNL4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.99□□□□□ -0.49
Q3KNL4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Gm45930-201ENSMUST00000221330 292 ntBASIC11.99□□□□□ -0.49
Q3KNL4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.99□□□□□ -0.49
Q3KNL4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Q3KNL4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.99□□□□□ -0.49
Q3KNL4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Q3KNL4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Q3KNL4 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.99□□□□□ -0.49
Q3KNL4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Q3KNL4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.99□□□□□ -0.49
Q3KNL4 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Q3KNL4 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Q3KNL4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.98□□□□□ -0.49
Q3KNL4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.98□□□□□ -0.49
Q3KNL4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.98□□□□□ -0.49
Q3KNL4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Q3KNL4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Q3KNL4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Q3KNL4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
Q3KNL4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Gm9083-201ENSMUST00000120423 819 ntBASIC11.98□□□□□ -0.49
Q3KNL4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.98□□□□□ -0.49
Q3KNL4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.98□□□□□ -0.49
Q3KNL4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.98□□□□□ -0.49
Q3KNL4 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.98□□□□□ -0.49
Q3KNL4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Q3KNL4 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.98□□□□□ -0.49
Q3KNL4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Q3KNL4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Q3KNL4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3KNL4 Rgr-203ENSMUST00000225070 4704 ntBASIC11.98□□□□□ -0.49
Q3KNL4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Q3KNL4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.97□□□□□ -0.49
Q3KNL4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms