Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.21□□□□□ -0.3
Col9a2Q07643 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col9a2Q07643 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col9a2Q07643 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm5706-201ENSMUST00000181525 993 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm17931-201ENSMUST00000208132 634 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.2□□□□□ -0.3
Col9a2Q07643 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.2□□□□□ -0.3
Col9a2Q07643 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col9a2Q07643 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.19□□□□□ -0.3
Col9a2Q07643 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Gm9062-201ENSMUST00000117712 727 ntBASIC13.19□□□□□ -0.3
Col9a2Q07643 Gm12501-201ENSMUST00000119163 529 ntBASIC13.19□□□□□ -0.3
Col9a2Q07643 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Mir7677-201ENSMUST00000184226 67 ntBASIC13.19□□□□□ -0.3
Col9a2Q07643 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.19□□□□□ -0.3
Col9a2Q07643 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.19□□□□□ -0.3
Col9a2Q07643 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col9a2Q07643 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Col9a2Q07643 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm12857-201ENSMUST00000117678 592 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms