Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn3Q07409 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn3Q07409 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn3Q07409 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.84□□□□□ -0.35
Cntn3Q07409 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cntn3Q07409 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cntn3Q07409 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Cntn3Q07409 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cntn3Q07409 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Cntn3Q07409 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.83□□□□□ -0.36
Cntn3Q07409 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm19994-201ENSMUST00000217086 586 ntBASIC12.83□□□□□ -0.36
Cntn3Q07409 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.83□□□□□ -0.36
Cntn3Q07409 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.83□□□□□ -0.36
Cntn3Q07409 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cntn3Q07409 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn3Q07409 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cntn3Q07409 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.82□□□□□ -0.36
Cntn3Q07409 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Gm7857-201ENSMUST00000117957 358 ntBASIC12.82□□□□□ -0.36
Cntn3Q07409 Gm4909-201ENSMUST00000118749 794 ntBASIC12.82□□□□□ -0.36
Cntn3Q07409 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Gm18558-201ENSMUST00000186253 1214 ntBASIC12.82□□□□□ -0.36
Cntn3Q07409 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.82□□□□□ -0.36
Cntn3Q07409 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.82□□□□□ -0.36
Cntn3Q07409 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.82□□□□□ -0.36
Cntn3Q07409 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn3Q07409 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cntn3Q07409 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms