Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.28□□□□□ -0.28
Trim43cP86449 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim43cP86449 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim43cP86449 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Gm5070-201ENSMUST00000177599 862 ntBASIC13.28□□□□□ -0.28
Trim43cP86449 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.28□□□□□ -0.28
Trim43cP86449 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.28□□□□□ -0.28
Trim43cP86449 Gm7783-201ENSMUST00000204795 781 ntBASIC13.28□□□□□ -0.28
Trim43cP86449 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim43cP86449 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trim43cP86449 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim43cP86449 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43cP86449 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43cP86449 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43cP86449 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43cP86449 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43cP86449 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.27□□□□□ -0.28
Trim43cP86449 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim43cP86449 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.27□□□□□ -0.28
Trim43cP86449 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Gm14109-201ENSMUST00000118814 309 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim43cP86449 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 AA914427-201ENSMUST00000193194 1166 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Gm38266-201ENSMUST00000194931 421 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Gm10312-201ENSMUST00000078515 489 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Trim43cP86449 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.27□□□□□ -0.29
Trim43cP86449 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43cP86449 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43cP86449 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim43cP86449 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43cP86449 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim43cP86449 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43cP86449 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.26□□□□□ -0.29
Trim43cP86449 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.26□□□□□ -0.29
Trim43cP86449 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim43cP86449 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Mir1938-201ENSMUST00000158746 100 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms