Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Gm18711-201ENSMUST00000199341 750 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
H3f3aP84244 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
H3f3aP84244 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.88□□□□□ -0.67
H3f3aP84244 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.88□□□□□ -0.67
H3f3aP84244 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Gm27320-201ENSMUST00000184892 109 ntBASIC10.88□□□□□ -0.67
H3f3aP84244 Gm38317-201ENSMUST00000195564 343 ntBASIC10.88□□□□□ -0.67
H3f3aP84244 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.88□□□□□ -0.67
H3f3aP84244 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.88□□□□□ -0.67
H3f3aP84244 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.88□□□□□ -0.67
H3f3aP84244 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
H3f3aP84244 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.88□□□□□ -0.67
H3f3aP84244 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.88□□□□□ -0.67
H3f3aP84244 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.88□□□□□ -0.67
H3f3aP84244 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H3f3aP84244 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.87□□□□□ -0.67
H3f3aP84244 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.87□□□□□ -0.67
H3f3aP84244 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Gm25668-201ENSMUST00000157700 129 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Rprl1-201ENSMUST00000158050 327 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Gm5070-201ENSMUST00000177599 862 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Gm9230-201ENSMUST00000188228 532 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.87□□□□□ -0.67
H3f3aP84244 AA914427-201ENSMUST00000193194 1166 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms