Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.45□□□□□ -0.58
Six5P70178 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Six5P70178 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.45□□□□□ -0.58
Six5P70178 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Six5P70178 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.44□□□□□ -0.58
Six5P70178 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Six5P70178 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.44□□□□□ -0.58
Six5P70178 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 Gm12015-201ENSMUST00000117065 843 ntBASIC11.44□□□□□ -0.58
Six5P70178 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.44□□□□□ -0.58
Six5P70178 Gm44364-201ENSMUST00000198368 141 ntBASIC11.44□□□□□ -0.58
Six5P70178 Gm45331-201ENSMUST00000209868 554 ntBASIC11.44□□□□□ -0.58
Six5P70178 Gm45865-201ENSMUST00000211815 945 ntBASIC11.44□□□□□ -0.58
Six5P70178 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.44□□□□□ -0.58
Six5P70178 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.44□□□□□ -0.58
Six5P70178 Gm8712-201ENSMUST00000221090 701 ntBASIC11.44□□□□□ -0.58
Six5P70178 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.44□□□□□ -0.58
Six5P70178 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.44□□□□□ -0.58
Six5P70178 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.44□□□□□ -0.58
Six5P70178 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.44□□□□□ -0.58
Six5P70178 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Gm10312-201ENSMUST00000078515 489 ntBASIC11.44□□□□□ -0.58
Six5P70178 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.44□□□□□ -0.58
Six5P70178 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Six5P70178 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.44□□□□□ -0.58
Six5P70178 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six5P70178 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.44□□□□□ -0.58
Six5P70178 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.44□□□□□ -0.58
Six5P70178 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.44□□□□□ -0.58
Six5P70178 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.44□□□□□ -0.58
Six5P70178 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Six5P70178 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.43□□□□□ -0.58
Six5P70178 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Gm15198-201ENSMUST00000117283 177 ntBASIC11.43□□□□□ -0.58
Six5P70178 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.43□□□□□ -0.58
Six5P70178 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.43□□□□□ -0.58
Six5P70178 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.43□□□□□ -0.58
Six5P70178 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.43□□□□□ -0.58
Six5P70178 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Six5P70178 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.43□□□□□ -0.58
Six5P70178 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Gm6334-201ENSMUST00000207083 228 ntBASIC11.43□□□□□ -0.58
Six5P70178 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.43□□□□□ -0.58
Six5P70178 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.43□□□□□ -0.58
Six5P70178 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms