Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp5P56399 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.25□□□□□ -0.13
Usp5P56399 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp5P56399 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Gm14028-201ENSMUST00000117434 479 ntBASIC14.24□□□□□ -0.13
Usp5P56399 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.24□□□□□ -0.13
Usp5P56399 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Gm16570-201ENSMUST00000161951 436 ntBASIC14.24□□□□□ -0.13
Usp5P56399 Gm16505-201ENSMUST00000179981 232 ntBASIC14.24□□□□□ -0.13
Usp5P56399 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.24□□□□□ -0.13
Usp5P56399 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp5P56399 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Usp5P56399 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Usp5P56399 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp5P56399 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp5P56399 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp5P56399 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Gm24749-201ENSMUST00000157838 343 ntBASIC14.23□□□□□ -0.13
Usp5P56399 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp5P56399 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.23□□□□□ -0.13
Usp5P56399 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp5P56399 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp5P56399 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp5P56399 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Usp5P56399 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Usp5P56399 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp5P56399 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp5P56399 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Usp5P56399 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Usp5P56399 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.22□□□□□ -0.13
Usp5P56399 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp5P56399 Gm44882-201ENSMUST00000205702 802 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms