Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.94□□□□□ -0.66
Abcd3P55096 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm23912-201ENSMUST00000104687 87 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm13786-201ENSMUST00000122371 333 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm24845-201ENSMUST00000158034 109 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.94□□□□□ -0.66
Abcd3P55096 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Gm42627-201ENSMUST00000197347 224 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Gm18054-201ENSMUST00000207539 555 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm7046-201ENSMUST00000221351 977 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Morn2-202ENSMUST00000227729 656 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.94□□□□□ -0.66
Abcd3P55096 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Abcd3P55096 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Abcd3P55096 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Abcd3P55096 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Gm25214-201ENSMUST00000104573 129 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Gm11531-201ENSMUST00000117614 555 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.93□□□□□ -0.66
Abcd3P55096 Gm27572-201ENSMUST00000183702 255 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Gm29396-201ENSMUST00000185659 716 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Abcd3P55096 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.93□□□□□ -0.66
Abcd3P55096 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.93□□□□□ -0.66
Abcd3P55096 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Gm10478-201ENSMUST00000084451 396 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.93□□□□□ -0.66
Abcd3P55096 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Abcd3P55096 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Abcd3P55096 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms