Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.81□□□□□ -0.36
NcanP55066 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.81□□□□□ -0.36
NcanP55066 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.81□□□□□ -0.36
NcanP55066 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NcanP55066 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
NcanP55066 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.81□□□□□ -0.36
NcanP55066 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.8□□□□□ -0.36
NcanP55066 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NcanP55066 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NcanP55066 Gm11560-201ENSMUST00000117567 948 ntBASIC12.8□□□□□ -0.36
NcanP55066 Gm16459-201ENSMUST00000121443 686 ntBASIC12.8□□□□□ -0.36
NcanP55066 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.8□□□□□ -0.36
NcanP55066 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.8□□□□□ -0.36
NcanP55066 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.8□□□□□ -0.36
NcanP55066 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.8□□□□□ -0.36
NcanP55066 Gm17070-201ENSMUST00000170463 784 ntBASIC12.8□□□□□ -0.36
NcanP55066 Gm8574-201ENSMUST00000203207 924 ntBASIC12.8□□□□□ -0.36
NcanP55066 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.8□□□□□ -0.36
NcanP55066 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.8□□□□□ -0.36
NcanP55066 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.8□□□□□ -0.36
NcanP55066 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.8□□□□□ -0.36
NcanP55066 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.8□□□□□ -0.36
NcanP55066 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.8□□□□□ -0.36
NcanP55066 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.8□□□□□ -0.36
NcanP55066 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.8□□□□□ -0.36
NcanP55066 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.8□□□□□ -0.36
NcanP55066 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.8□□□□□ -0.36
NcanP55066 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NcanP55066 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.8□□□□□ -0.36
NcanP55066 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NcanP55066 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
NcanP55066 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NcanP55066 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NcanP55066 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.79□□□□□ -0.36
NcanP55066 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.79□□□□□ -0.36
NcanP55066 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NcanP55066 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.79□□□□□ -0.36
NcanP55066 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
NcanP55066 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.79□□□□□ -0.36
NcanP55066 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.79□□□□□ -0.36
NcanP55066 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.79□□□□□ -0.36
NcanP55066 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.79□□□□□ -0.36
NcanP55066 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.79□□□□□ -0.36
NcanP55066 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms