Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.01□□□□□ -0.33
NrlP54846 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Gm27438-201ENSMUST00000183480 110 ntBASIC13.01□□□□□ -0.33
NrlP54846 Gm44126-201ENSMUST00000204831 514 ntBASIC13.01□□□□□ -0.33
NrlP54846 Gm44545-201ENSMUST00000208262 746 ntBASIC13.01□□□□□ -0.33
NrlP54846 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.01□□□□□ -0.33
NrlP54846 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.01□□□□□ -0.33
NrlP54846 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.01□□□□□ -0.33
NrlP54846 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
NrlP54846 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NrlP54846 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.01□□□□□ -0.33
NrlP54846 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.01□□□□□ -0.33
NrlP54846 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NrlP54846 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NrlP54846 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13□□□□□ -0.33
NrlP54846 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NrlP54846 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Gm9279-201ENSMUST00000223175 1606 ntBASIC13□□□□□ -0.33
NrlP54846 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Mir680-2-201ENSMUST00000102163 110 ntBASIC13□□□□□ -0.33
NrlP54846 Gm23251-201ENSMUST00000103773 110 ntBASIC13□□□□□ -0.33
NrlP54846 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13□□□□□ -0.33
NrlP54846 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13□□□□□ -0.33
NrlP54846 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Gm25881-201ENSMUST00000157783 103 ntBASIC13□□□□□ -0.33
NrlP54846 H2-Q3-201ENSMUST00000172583 608 ntBASIC13□□□□□ -0.33
NrlP54846 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
NrlP54846 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13□□□□□ -0.33
NrlP54846 AC154849.4-201ENSMUST00000224868 365 ntBASIC13□□□□□ -0.33
NrlP54846 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13□□□□□ -0.33
NrlP54846 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NrlP54846 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NrlP54846 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.99□□□□□ -0.33
NrlP54846 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.99□□□□□ -0.33
NrlP54846 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.99□□□□□ -0.33
NrlP54846 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.99□□□□□ -0.33
NrlP54846 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.99□□□□□ -0.33
NrlP54846 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.99□□□□□ -0.33
NrlP54846 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.99□□□□□ -0.33
NrlP54846 Gm10051-201ENSMUST00000145209 414 ntBASIC12.99□□□□□ -0.33
NrlP54846 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.99□□□□□ -0.33
NrlP54846 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.99□□□□□ -0.33
NrlP54846 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.99□□□□□ -0.33
NrlP54846 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms