Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atxn1P54254 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.17□□□□□ -0.46
Atxn1P54254 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Mir1901-201ENSMUST00000122616 78 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Gm28882-201ENSMUST00000185504 314 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Gm3793-201ENSMUST00000204973 672 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Atxn1P54254 Gm6867-201ENSMUST00000219165 425 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Ginm1-202ENSMUST00000065124 300 ntBASIC12.16□□□□□ -0.46
Atxn1P54254 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atxn1P54254 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Atxn1P54254 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
Atxn1P54254 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Atxn1P54254 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Atxn1P54254 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.15□□□□□ -0.46
Atxn1P54254 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Gm7851-201ENSMUST00000117574 323 ntBASIC12.15□□□□□ -0.46
Atxn1P54254 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Atxn1P54254 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Atxn1P54254 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.15□□□□□ -0.46
Atxn1P54254 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Atxn1P54254 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.15□□□□□ -0.46
Atxn1P54254 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.15□□□□□ -0.46
Atxn1P54254 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.15□□□□□ -0.46
Atxn1P54254 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.15□□□□□ -0.46
Atxn1P54254 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.15□□□□□ -0.46
Atxn1P54254 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Atxn1P54254 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms