Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox2P48432 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Mir6977-201ENSMUST00000184960 64 ntBASIC11.42□□□□□ -0.58
Sox2P48432 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Sox2P48432 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.42□□□□□ -0.58
Sox2P48432 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox2P48432 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.42□□□□□ -0.58
Sox2P48432 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox2P48432 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox2P48432 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox2P48432 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.42□□□□□ -0.58
Sox2P48432 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Sox2P48432 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox2P48432 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Sox2P48432 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox2P48432 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.41□□□□□ -0.58
Sox2P48432 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.41□□□□□ -0.58
Sox2P48432 Gm27437-201ENSMUST00000183429 107 ntBASIC11.41□□□□□ -0.58
Sox2P48432 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox2P48432 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox2P48432 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sox2P48432 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox2P48432 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.41□□□□□ -0.58
Sox2P48432 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox2P48432 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.41□□□□□ -0.58
Sox2P48432 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sox2P48432 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox2P48432 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox2P48432 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox2P48432 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox2P48432 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox2P48432 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sox2P48432 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.4□□□□□ -0.58
Sox2P48432 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Sox2P48432 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms