Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh2P43247 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh2P43247 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Msh2P43247 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh2P43247 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh2P43247 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh2P43247 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.6□□□□□ -0.39
Msh2P43247 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh2P43247 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh2P43247 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Msh2P43247 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Msh2P43247 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Gm17420-201ENSMUST00000164753 153 ntBASIC12.59□□□□□ -0.39
Msh2P43247 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.59□□□□□ -0.39
Msh2P43247 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.59□□□□□ -0.39
Msh2P43247 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.59□□□□□ -0.39
Msh2P43247 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh2P43247 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msh2P43247 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Msh2P43247 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Msh2P43247 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Msh2P43247 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Msh2P43247 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Msh2P43247 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Msh2P43247 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.58□□□□□ -0.4
Msh2P43247 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Gm13392-201ENSMUST00000117708 150 ntBASIC12.58□□□□□ -0.4
Msh2P43247 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.58□□□□□ -0.4
Msh2P43247 Gm18584-201ENSMUST00000203098 964 ntBASIC12.58□□□□□ -0.4
Msh2P43247 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.58□□□□□ -0.4
Msh2P43247 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Msh2P43247 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Msh2P43247 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.58□□□□□ -0.4
Msh2P43247 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msh2P43247 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.57□□□□□ -0.4
Msh2P43247 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Msh2P43247 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms