Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.19□□□□□ -0.62
Nkx2-2P42586 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-2P42586 Gm19187-201ENSMUST00000206781 892 ntBASIC11.19□□□□□ -0.62
Nkx2-2P42586 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.19□□□□□ -0.62
Nkx2-2P42586 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-2P42586 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-2P42586 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-2P42586 Map1b-203ENSMUST00000223725 2669 ntBASIC11.19□□□□□ -0.62
Nkx2-2P42586 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-2P42586 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.18□□□□□ -0.62
Nkx2-2P42586 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Gm22323-201ENSMUST00000103832 109 ntBASIC11.18□□□□□ -0.62
Nkx2-2P42586 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Gm5070-201ENSMUST00000177599 862 ntBASIC11.18□□□□□ -0.62
Nkx2-2P42586 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.18□□□□□ -0.62
Nkx2-2P42586 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-2P42586 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm11989-201ENSMUST00000117240 672 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm11362-201ENSMUST00000118838 850 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm12164-201ENSMUST00000121695 551 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm14381-201ENSMUST00000122105 414 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm5706-201ENSMUST00000181525 993 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm7783-201ENSMUST00000204795 781 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms