Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 AC101945.2-201ENSMUST00000227886 1377 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Rpl28P41105 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Rpl28P41105 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
Rpl28P41105 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
Rpl28P41105 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Rpl28P41105 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl28P41105 Gm37600-201ENSMUST00000193764 3292 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm28719-201ENSMUST00000187779 1757 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm13612-201ENSMUST00000119276 390 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Mir1894-201ENSMUST00000122802 81 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC8.21□□□□□ -1.1
Rpl28P41105 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Rpl28P41105 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm9124-201ENSMUST00000191789 1092 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Gm9113-201ENSMUST00000192510 1018 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Gm9131-201ENSMUST00000193557 1089 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Gm9121-201ENSMUST00000193749 1071 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm7287-201ENSMUST00000205267 602 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC8.21□□□□□ -1.1
Rpl28P41105 AC098716.1-201ENSMUST00000213527 703 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm10371-202ENSMUST00000228010 1081 ntBASIC8.21□□□□□ -1.1
Rpl28P41105 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Rpl28P41105 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC8.21□□□□□ -1.1
Rpl28P41105 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC8.21□□□□□ -1.1
Rpl28P41105 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC8.21□□□□□ -1.1
Rpl28P41105 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC8.21□□□□□ -1.1
Rpl28P41105 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl28P41105 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms