Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm11663-201ENSMUST00000117888 290 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm16071-201ENSMUST00000119589 793 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm17826-201ENSMUST00000189720 798 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm43520-201ENSMUST00000197996 164 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm44980-201ENSMUST00000205826 314 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sftpa1P35242 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sftpa1P35242 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.27□□□□□ -0.6
Sftpa1P35242 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sftpa1P35242 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.27□□□□□ -0.6
Sftpa1P35242 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sftpa1P35242 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sftpa1P35242 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sftpa1P35242 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sftpa1P35242 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sftpa1P35242 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm12516-201ENSMUST00000120819 385 ntBASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.27□□□□□ -0.61
Sftpa1P35242 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm45575-201ENSMUST00000210283 548 ntBASIC11.27□□□□□ -0.61
Sftpa1P35242 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.27□□□□□ -0.61
Sftpa1P35242 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.27□□□□□ -0.61
Sftpa1P35242 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sftpa1P35242 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sftpa1P35242 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms