Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.99□□□□□ -0.17
Vcam1P29533 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vcam1P29533 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vcam1P29533 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vcam1P29533 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcam1P29533 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vcam1P29533 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vcam1P29533 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Gm15207-201ENSMUST00000119259 442 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 Gm11956-201ENSMUST00000119525 512 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.98□□□□□ -0.17
Vcam1P29533 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.98□□□□□ -0.17
Vcam1P29533 Gm7666-201ENSMUST00000146631 819 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vcam1P29533 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 Gm38117-201ENSMUST00000194653 939 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 Gm17831-201ENSMUST00000205579 900 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.98□□□□□ -0.17
Vcam1P29533 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.98□□□□□ -0.17
Vcam1P29533 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vcam1P29533 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vcam1P29533 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcam1P29533 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vcam1P29533 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm15566-201ENSMUST00000121130 590 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Gm4726-201ENSMUST00000135604 736 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm6019-201ENSMUST00000148369 736 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Vcam1P29533 Mir8115-201ENSMUST00000184992 119 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm19287-201ENSMUST00000203190 358 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vcam1P29533 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vcam1P29533 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vcam1P29533 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.97□□□□□ -0.17
Vcam1P29533 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.97□□□□□ -0.17
Vcam1P29533 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vcam1P29533 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vcam1P29533 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms