Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nckap1P28660 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nckap1P28660 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nckap1P28660 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nckap1P28660 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Nckap1P28660 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nckap1P28660 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nckap1P28660 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.2□□□□□ -0.46
Nckap1P28660 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.19□□□□□ -0.46
Nckap1P28660 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Nckap1P28660 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.19□□□□□ -0.46
Nckap1P28660 Gm43947-201ENSMUST00000203019 959 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Spcs1-203ENSMUST00000226374 592 ntBASIC12.19□□□□□ -0.46
Nckap1P28660 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nckap1P28660 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nckap1P28660 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nckap1P28660 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Nckap1P28660 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Nckap1P28660 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.18□□□□□ -0.46
Nckap1P28660 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nckap1P28660 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.18□□□□□ -0.46
Nckap1P28660 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Nckap1P28660 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Cog3-203ENSMUST00000227473 4197 ntBASIC12.18□□□□□ -0.46
Nckap1P28660 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.18□□□□□ -0.46
Nckap1P28660 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nckap1P28660 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.18□□□□□ -0.46
Nckap1P28660 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.17□□□□□ -0.46
Nckap1P28660 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms