Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.69□□□□□ -0.22
Col2a1P28481 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.69□□□□□ -0.22
Col2a1P28481 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.69□□□□□ -0.22
Col2a1P28481 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col2a1P28481 Gm25076-201ENSMUST00000104098 132 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 Gm13888-201ENSMUST00000119148 422 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col2a1P28481 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 Gm27438-201ENSMUST00000183480 110 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.68□□□□□ -0.22
Col2a1P28481 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.68□□□□□ -0.22
Col2a1P28481 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Col2a1P28481 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col2a1P28481 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Col2a1P28481 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col2a1P28481 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.68□□□□□ -0.22
Col2a1P28481 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col2a1P28481 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col2a1P28481 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.67□□□□□ -0.22
Col2a1P28481 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm11451-201ENSMUST00000118946 630 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm11960-201ENSMUST00000122068 925 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Gm26047-201ENSMUST00000157308 113 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm26047-202ENSMUST00000198840 115 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.67□□□□□ -0.22
Col2a1P28481 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col2a1P28481 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col2a1P28481 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm23272-201ENSMUST00000104053 129 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Col2a1P28481 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Gm12899-201ENSMUST00000120565 551 ntBASIC13.67□□□□□ -0.22
Col2a1P28481 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.67□□□□□ -0.22
Col2a1P28481 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.67□□□□□ -0.22
Col2a1P28481 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.67□□□□□ -0.22
Col2a1P28481 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col2a1P28481 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col2a1P28481 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms