Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Gm15352-201ENSMUST00000118696 270 ntBASIC12.62□□□□□ -0.39
Hoxd8P23463 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.62□□□□□ -0.39
Hoxd8P23463 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Gm19287-201ENSMUST00000203190 358 ntBASIC12.62□□□□□ -0.39
Hoxd8P23463 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Gm17931-201ENSMUST00000208132 634 ntBASIC12.62□□□□□ -0.39
Hoxd8P23463 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC12.62□□□□□ -0.39
Hoxd8P23463 Gm2553-201ENSMUST00000215986 605 ntBASIC12.62□□□□□ -0.39
Hoxd8P23463 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.62□□□□□ -0.39
Hoxd8P23463 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm14193-201ENSMUST00000105067 153 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm12579-201ENSMUST00000118040 783 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm8731-201ENSMUST00000118088 412 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm15207-201ENSMUST00000119259 442 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm15573-201ENSMUST00000119487 540 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC12.61□□□□□ -0.39
Hoxd8P23463 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm36943-201ENSMUST00000194422 282 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxd8P23463 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.61□□□□□ -0.39
Hoxd8P23463 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxd8P23463 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxd8P23463 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxd8P23463 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxd8P23463 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.6□□□□□ -0.39
Hoxd8P23463 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxd8P23463 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxd8P23463 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms