Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Cdx1P18111 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.91□□□□□ -0.82
Cdx1P18111 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Gm12485-201ENSMUST00000119641 291 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.91□□□□□ -0.82
Cdx1P18111 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Gm29649-201ENSMUST00000185649 419 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Gm38223-201ENSMUST00000194484 695 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Gm44397-201ENSMUST00000195950 113 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.91□□□□□ -0.82
Cdx1P18111 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.91□□□□□ -0.82
Cdx1P18111 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx1P18111 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.91□□□□□ -0.82
Cdx1P18111 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx1P18111 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Cdx1P18111 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 Gm15376-201ENSMUST00000122258 783 ntBASIC9.9□□□□□ -0.82
Cdx1P18111 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.9□□□□□ -0.82
Cdx1P18111 Gm8652-201ENSMUST00000181363 964 ntBASIC9.9□□□□□ -0.82
Cdx1P18111 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.9□□□□□ -0.82
Cdx1P18111 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.9□□□□□ -0.82
Cdx1P18111 Gm7561-201ENSMUST00000211203 886 ntBASIC9.9□□□□□ -0.82
Cdx1P18111 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.9□□□□□ -0.82
Cdx1P18111 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx1P18111 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx1P18111 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.9□□□□□ -0.83
Cdx1P18111 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Cdx1P18111 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Cdx1P18111 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx1P18111 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms