Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NclP09405 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NclP09405 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NclP09405 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NclP09405 Gm20426-201ENSMUST00000173657 440 ntBASIC18.11■□□□□ 0.49
NclP09405 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC18.11■□□□□ 0.49
NclP09405 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
NclP09405 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NclP09405 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NclP09405 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NclP09405 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NclP09405 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NclP09405 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC18.1■□□□□ 0.49
NclP09405 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Gm7722-201ENSMUST00000120646 741 ntBASIC18.1■□□□□ 0.49
NclP09405 Gm12201-201ENSMUST00000120657 1234 ntBASIC18.1■□□□□ 0.49
NclP09405 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC18.1■□□□□ 0.49
NclP09405 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC18.1■□□□□ 0.49
NclP09405 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Gm9630-201ENSMUST00000178304 885 ntBASIC18.1■□□□□ 0.49
NclP09405 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.1■□□□□ 0.49
NclP09405 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC18.1■□□□□ 0.49
NclP09405 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Gm27194-201ENSMUST00000175753 2936 ntBASIC18.1■□□□□ 0.49
NclP09405 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NclP09405 AC164107.1-201ENSMUST00000227730 2161 ntBASIC18.1■□□□□ 0.49
NclP09405 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NclP09405 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 AC159308.2-201ENSMUST00000213592 2325 ntBASIC18.09■□□□□ 0.49
NclP09405 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC18.09■□□□□ 0.49
NclP09405 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC18.09■□□□□ 0.49
NclP09405 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Gm44882-201ENSMUST00000205702 802 ntBASIC18.09■□□□□ 0.49
NclP09405 Spcs1-203ENSMUST00000226374 592 ntBASIC18.09■□□□□ 0.49
NclP09405 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NclP09405 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NclP09405 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC18.08■□□□□ 0.49
NclP09405 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NclP09405 Gm44942-201ENSMUST00000096093 2072 ntBASIC18.08■□□□□ 0.49
NclP09405 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NclP09405 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Gm9062-201ENSMUST00000117712 727 ntBASIC18.08■□□□□ 0.48
NclP09405 Gm15515-201ENSMUST00000117827 822 ntBASIC18.08■□□□□ 0.48
NclP09405 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Gm28719-201ENSMUST00000187779 1757 ntBASIC18.08■□□□□ 0.48
NclP09405 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NclP09405 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
NclP09405 Gm45266-201ENSMUST00000210111 2173 ntBASIC18.08■□□□□ 0.48
NclP09405 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NclP09405 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
NclP09405 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NclP09405 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms