Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Gzmn-202ENSMUST00000225535 989 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm12337-201ENSMUST00000119634 400 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm12783-201ENSMUST00000121425 397 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm15881-201ENSMUST00000148792 942 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm8902-201ENSMUST00000174341 1096 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm42937-201ENSMUST00000197360 752 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm9132-201ENSMUST00000210182 832 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm45398-201ENSMUST00000210561 165 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Hoxb3P09026 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Snora73b-201ENSMUST00000083419 205 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.31□□□□□ -0.44
Hoxb3P09026 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxb3P09026 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxb3P09026 AC140393.3-201ENSMUST00000228396 1352 ntBASIC12.3□□□□□ -0.44
Hoxb3P09026 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxb3P09026 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxb3P09026 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.3□□□□□ -0.44
Hoxb3P09026 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxb3P09026 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxb3P09026 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxb3P09026 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxb3P09026 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.3□□□□□ -0.44
Hoxb3P09026 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.3□□□□□ -0.44
Hoxb3P09026 Gm11233-201ENSMUST00000122357 634 ntBASIC12.3□□□□□ -0.44
Hoxb3P09026 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Gm8824-201ENSMUST00000182962 990 ntBASIC12.3□□□□□ -0.44
Hoxb3P09026 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxb3P09026 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.3□□□□□ -0.44
Hoxb3P09026 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms