Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Gm13916-201ENSMUST00000117368 628 ntBASIC12.62□□□□□ -0.39
PrnpP04925 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Gm23045-201ENSMUST00000175041 96 ntBASIC12.62□□□□□ -0.39
PrnpP04925 Gm9630-201ENSMUST00000178304 885 ntBASIC12.62□□□□□ -0.39
PrnpP04925 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.62□□□□□ -0.39
PrnpP04925 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Snora73b-201ENSMUST00000083419 205 ntBASIC12.62□□□□□ -0.39
PrnpP04925 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.62□□□□□ -0.39
PrnpP04925 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
PrnpP04925 Gm15610-201ENSMUST00000120584 195 ntBASIC12.61□□□□□ -0.39
PrnpP04925 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Gm23771-201ENSMUST00000178702 110 ntBASIC12.61□□□□□ -0.39
PrnpP04925 Mir7076-201ENSMUST00000183519 74 ntBASIC12.61□□□□□ -0.39
PrnpP04925 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.61□□□□□ -0.39
PrnpP04925 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.61□□□□□ -0.39
PrnpP04925 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PrnpP04925 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PrnpP04925 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrnpP04925 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.6□□□□□ -0.39
PrnpP04925 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PrnpP04925 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
PrnpP04925 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
PrnpP04925 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.6□□□□□ -0.39
PrnpP04925 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Gm14193-201ENSMUST00000105067 153 ntBASIC12.6□□□□□ -0.39
PrnpP04925 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.6□□□□□ -0.39
PrnpP04925 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.6□□□□□ -0.39
PrnpP04925 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PrnpP04925 Gm22138-201ENSMUST00000158748 128 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms