Protein–RNA interactions for Protein: P04230

H2-Eb1, H-2 class II histocompatibility antigen, E-B beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-Eb1P04230 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.11□□□□□ -0.47
H2-Eb1P04230 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.11□□□□□ -0.47
H2-Eb1P04230 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.11□□□□□ -0.47
H2-Eb1P04230 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.11□□□□□ -0.47
H2-Eb1P04230 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
H2-Eb1P04230 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.1□□□□□ -0.47
H2-Eb1P04230 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.1□□□□□ -0.47
H2-Eb1P04230 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.1□□□□□ -0.47
H2-Eb1P04230 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Gm37201-201ENSMUST00000191845 523 ntBASIC12.1□□□□□ -0.47
H2-Eb1P04230 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2-Eb1P04230 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Gm14999-201ENSMUST00000121039 624 ntBASIC12.09□□□□□ -0.47
H2-Eb1P04230 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.09□□□□□ -0.47
H2-Eb1P04230 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2-Eb1P04230 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2-Eb1P04230 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2-Eb1P04230 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2-Eb1P04230 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms