Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.88□□□□□ -0.67
Col5a1O88207 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.88□□□□□ -0.67
Col5a1O88207 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.88□□□□□ -0.67
Col5a1O88207 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.88□□□□□ -0.67
Col5a1O88207 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col5a1O88207 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.88□□□□□ -0.67
Col5a1O88207 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.87□□□□□ -0.67
Col5a1O88207 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Col5a1O88207 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.87□□□□□ -0.67
Col5a1O88207 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm26989-201ENSMUST00000182608 749 ntBASIC10.87□□□□□ -0.67
Col5a1O88207 Gm42511-201ENSMUST00000196160 234 ntBASIC10.87□□□□□ -0.67
Col5a1O88207 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.87□□□□□ -0.67
Col5a1O88207 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.87□□□□□ -0.67
Col5a1O88207 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.87□□□□□ -0.67
Col5a1O88207 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.87□□□□□ -0.67
Col5a1O88207 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col5a1O88207 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.86□□□□□ -0.67
Col5a1O88207 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.86□□□□□ -0.67
Col5a1O88207 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Col5a1O88207 Gm12419-201ENSMUST00000116649 636 ntBASIC10.86□□□□□ -0.67
Col5a1O88207 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Col5a1O88207 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.86□□□□□ -0.67
Col5a1O88207 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.86□□□□□ -0.67
Col5a1O88207 Gm20414-201ENSMUST00000172918 646 ntBASIC10.86□□□□□ -0.67
Col5a1O88207 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Gm18968-201ENSMUST00000221319 862 ntBASIC10.86□□□□□ -0.67
Col5a1O88207 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col5a1O88207 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms