Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim1O70400 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.11□□□□□ -0.47
Pdlim1O70400 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.11□□□□□ -0.47
Pdlim1O70400 Gm32999-201ENSMUST00000192693 562 ntBASIC12.11□□□□□ -0.47
Pdlim1O70400 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdlim1O70400 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Pdlim1O70400 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdlim1O70400 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pdlim1O70400 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Gzmn-202ENSMUST00000225535 989 ntBASIC12.1□□□□□ -0.47
Pdlim1O70400 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdlim1O70400 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim1O70400 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm11989-201ENSMUST00000117240 672 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm11362-201ENSMUST00000118838 850 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm14247-201ENSMUST00000120950 237 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm17376-201ENSMUST00000166016 84 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Gm6082-201ENSMUST00000215204 454 ntBASIC12.09□□□□□ -0.47
Pdlim1O70400 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms