Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdmt1O55055 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdmt1O55055 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trdmt1O55055 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.42□□□□□ -0.26
Trdmt1O55055 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trdmt1O55055 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trdmt1O55055 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm14193-201ENSMUST00000105067 153 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm12579-201ENSMUST00000118040 783 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm8731-201ENSMUST00000118088 412 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm8737-201ENSMUST00000122208 642 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm22138-201ENSMUST00000158748 128 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm4310-201ENSMUST00000177847 889 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm23771-201ENSMUST00000178702 110 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Mir7076-201ENSMUST00000183519 74 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Mir8115-201ENSMUST00000184992 119 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm5714-201ENSMUST00000197343 566 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.42□□□□□ -0.26
Trdmt1O55055 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trdmt1O55055 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trdmt1O55055 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdmt1O55055 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.41□□□□□ -0.26
Trdmt1O55055 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm22920-201ENSMUST00000102175 109 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm11949-201ENSMUST00000117640 372 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm15207-201ENSMUST00000119259 442 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm23045-201ENSMUST00000175041 96 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm9630-201ENSMUST00000178304 885 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm27910-201ENSMUST00000185004 107 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm4034-201ENSMUST00000187674 480 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.41□□□□□ -0.26
Trdmt1O55055 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm6867-201ENSMUST00000219165 425 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.41□□□□□ -0.26
Trdmt1O55055 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trdmt1O55055 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdmt1O55055 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trdmt1O55055 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms