Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.59□□□□□ -0.39
Sdc4O35988 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.59□□□□□ -0.39
Sdc4O35988 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Sdc4O35988 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
Sdc4O35988 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.59□□□□□ -0.39
Sdc4O35988 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.59□□□□□ -0.39
Sdc4O35988 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sdc4O35988 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Sdc4O35988 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.58□□□□□ -0.4
Sdc4O35988 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.58□□□□□ -0.4
Sdc4O35988 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.58□□□□□ -0.4
Sdc4O35988 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.58□□□□□ -0.4
Sdc4O35988 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.58□□□□□ -0.4
Sdc4O35988 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Gm27552-201ENSMUST00000183351 62 ntBASIC12.58□□□□□ -0.4
Sdc4O35988 Gm27844-201ENSMUST00000183613 62 ntBASIC12.58□□□□□ -0.4
Sdc4O35988 Gm43378-201ENSMUST00000199336 582 ntBASIC12.58□□□□□ -0.4
Sdc4O35988 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Sdc4O35988 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sdc4O35988 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sdc4O35988 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sdc4O35988 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc4O35988 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.57□□□□□ -0.4
Sdc4O35988 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Sdc4O35988 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sdc4O35988 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 B9d1os-201ENSMUST00000137010 674 ntBASIC12.57□□□□□ -0.4
Sdc4O35988 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.57□□□□□ -0.4
Sdc4O35988 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Mir6979-201ENSMUST00000183927 56 ntBASIC12.57□□□□□ -0.4
Sdc4O35988 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sdc4O35988 Mir7677-201ENSMUST00000184226 67 ntBASIC12.57□□□□□ -0.4
Sdc4O35988 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.57□□□□□ -0.4
Sdc4O35988 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Gm5455-201ENSMUST00000058710 715 ntBASIC12.57□□□□□ -0.4
Sdc4O35988 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Sdc4O35988 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sdc4O35988 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc4O35988 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.56□□□□□ -0.4
Sdc4O35988 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms