Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Mir1247-201ENSMUST00000116706 82 ntBASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Gm6023-201ENSMUST00000118217 606 ntBASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Gm15824-201ENSMUST00000119516 955 ntBASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.39□□□□□ -0.43
Tnfrsf11bO08712 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Gm10434-201ENSMUST00000101158 471 ntBASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Gm22018-201ENSMUST00000104357 131 ntBASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf11bO08712 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm13829-201ENSMUST00000119600 138 ntBASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm2546-201ENSMUST00000182630 991 ntBASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm28882-201ENSMUST00000185504 314 ntBASIC12.37□□□□□ -0.43
Tnfrsf11bO08712 Gm5370-201ENSMUST00000187187 574 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms