Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Gm8213-201ENSMUST00000118191 441 ntBASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Gm27331-201ENSMUST00000183705 60 ntBASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Gm37497-201ENSMUST00000195830 798 ntBASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa8J3QNX5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm2231-201ENSMUST00000125661 612 ntBASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm28911-201ENSMUST00000188837 117 ntBASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm15823-201ENSMUST00000064305 670 ntBASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa8J3QNX5 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.1□□□□□ -0.63
Shisa8J3QNX5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms